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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5361777_5362008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5361777 - 5362008

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTACCCGTAGCT

Flanking Amino Acid:

NCSLGNFDNNVGSCGFNSRI

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

68.8

0.42

0.9

60.8

40.2

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

48.3

-0

2.2

70.34

46.1

Associated Gene:

Gene:

SLC27A4

Ensembl Gene ID:

ENSAPLG00000008614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008987

5359736 - 5365467

5732