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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5365100_5365414_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5365100 - 5365414

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGCTGGT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAG

U12 Branch Point Sequence:

TTCTTTTTGGCA

Flanking Amino Acid:

GTRQCQVLAKITGLVLLRVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.3

56.1

43.1

Major BPS

50.4

0.01

1.5

59.3

35.9

Major PPT

85.1

0.79

0.9

83.9

31.1

Minor 5ss

35.5

-1.6

3.6

52.1

45.5

Minor BPS

44.8

-0.4

3.4

68.85

38.3

Associated Gene:

Gene:

SLC27A4

Ensembl Gene ID:

ENSAPLG00000008614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008987

5359736 - 5365467

5732