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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5376030_5376719_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5376030 - 5376719

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

GGGCACGGCACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

CTGCCCAGAGCG

Flanking Amino Acid:

CPSTSPRRGLGHQGLRRDDP

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

60.4

45.8

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

48.8

-0

1.1

37.7

39.5

Minor 5ss

25.8

-2.8

2.9

22.4

37.3

Minor BPS

42.2

-0.7

1.9

46.97

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026830

5375963 - 5377447

1485