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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5377865_5377972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5377865 - 5377972

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCTTG

5'SS Class:

major

3'SS Sequence:

GGTGTTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCTTCCTCACTC

Flanking Amino Acid:

RDAVRARLLRELNEAPEPPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.1

42.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

69.6

0.44

1.1

65.2

45.5

Minor 5ss

42.5

-0.8

56.3

47.9

Minor BPS

51.3

0.02

1.9

61.86

44.3

Associated Gene:

Gene:

TRUB2

Ensembl Gene ID:

ENSAPLG00000009254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009630

5377788 - 5381212

3425