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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5378250_5378603_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5378250 - 5378603

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

TCCCGTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

ATGCAGGTAATA

Flanking Amino Acid:

RLDVKASGVFVLGVGHGNKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

57.1

42.2

Major BPS

70.1

0.5

70.3

31.9

Major PPT

75.3

0.57

0.9

71.8

38.1

Minor 5ss

29.1

-2.4

36.9

40.3

Minor BPS

39.1

-0.8

2.5

51.82

40.3

Associated Gene:

Gene:

TRUB2

Ensembl Gene ID:

ENSAPLG00000009254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020683

5377243 - 5381212

3970

ENSAPLT00000009630

5377788 - 5381212

3425