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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5378666_5378974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5378666 - 5378974

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

CTTTCCTTGATA

Flanking Amino Acid:

TDRYHCHLTKVYTVGGLFGK

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

71.6

0.54

33.1

Major PPT

68.2

0.41

67.7

32.7

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

0.94

1.1

82.09

33.1

Associated Gene:

Gene:

TRUB2

Ensembl Gene ID:

ENSAPLG00000009254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020683

5377243 - 5381212

3970

ENSAPLT00000009630

5377788 - 5381212

3425