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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5379057_5379640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5379057 - 5379640

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTAATATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TCTACCTTAATA

Flanking Amino Acid:

TGKLVEKATFDHITREKLER

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

80.1

0.68

0.9

40.2

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

78.3

0.88

1.2

36.3

Associated Gene:

Gene:

TRUB2

Ensembl Gene ID:

ENSAPLG00000009254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009630

5377788 - 5381212

3425

ENSAPLT00000020683

5377243 - 5381212

3970