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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5379714_5380162_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5379714 - 5380162

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATGTATC

5'SS Class:

weak_major

3'SS Sequence:

TTTCCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TTTTCCTTTTCC

Flanking Amino Acid:

IQGTNHKALLLHSNIDMKTQ

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

71.2

38.6

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

49.3

-0

2.5

72.8

36.5

Minor BPS

49.2

-0

3.6

82.88

37.2

Associated Gene:

Gene:

TRUB2

Ensembl Gene ID:

ENSAPLG00000009254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020683

5377243 - 5381212

3970

ENSAPLT00000009630

5377788 - 5381212

3425