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Intron Name: Anas_platyrhynchos_platyrhynchos_18_538192_545539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

538192 - 545539

Intron Length:

7348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTCCTTACAA

Flanking Amino Acid:

NEDDHRKAAEIARQEGRVIL

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

35.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

87.6

0.85

0.7

81.2

36.5

Minor 5ss

35.9

-1.6

2.6

42.1

44.4

Minor BPS

67.3

0.54

1.7

77.66

38.8

Associated Gene:

Gene:

EXD3

Ensembl Gene ID:

ENSAPLG00000015358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016015

399892 - 700027

300136

ENSAPLT00000018211

399892 - 700027

300136