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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5396647_5398357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5396647 - 5398357

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTTAATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

73.9

32.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

0.8

74.4

Minor 5ss

39.8

-1.1

3.1

48.3

42.4

Minor BPS

74.9

0.76

1.1

33.7

Associated Gene:

Gene:

PPP1R26

Ensembl Gene ID:

ENSAPLG00000028234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045818

5391388 - 5398512

7125

ENSAPLT00000037397

5386913 - 5398512

11600