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Intron Name: Anas_platyrhynchos_platyrhynchos_18_540_8812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

540 - 8812

Intron Length:

8273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCATCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATCTGTTACA

Flanking Amino Acid:

EPEPSQPRARGIDVKSAGQS

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

69.4

35.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

78.1

0.63

0.9

71.9

37.9

Minor 5ss

25.3

-2.8

3.2

32.7

42.3

Minor BPS

-0.1

2.3

63.36

43.1

Associated Gene:

Gene:

SAPCD2

Ensembl Gene ID:

ENSAPLG00000005630

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005812

21 - 16642

16622