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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5572759_5587173_F

Intron Information:

Intron Rank:

147789

Intron Class:

major

Intron Phase:

Intron Coordinates:

5572759 - 5587173

Intron Length:

14415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

TTTCTCCTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

77.6

0.62

0.8

74.4

29.3

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

64.3

0.45

1.6

77.28

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041804

5572352 - 5587761

15410