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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5591325_5593943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5591325 - 5593943

Intron Length:

2619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATCAC

U12 Branch Point Sequence:

ATCACCAGAGCT

Flanking Amino Acid:

YIRAAFDGCAAKKGYQKTVL

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

63.9

42.6

Major BPS

49.2

-0

1.3

53.6

41.6

Major PPT

86.6

0.82

0.7

78.3

30.6

Minor 5ss

31.5

-2.1

3.3

40.1

Minor BPS

45.6

-0.2

65.58

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021854

5591178 - 5607342

16165