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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5597856_5599894_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5597856 - 5599894

Intron Length:

2039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

GTCCACAAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAA

U12 Branch Point Sequence:

CGTCCACAAACT

Flanking Amino Acid:

CIFPDKKSEGARITSWPKEN

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

65.3

40.7

Major BPS

55.9

0.15

63.2

34.1

Major PPT

41.8

37.1

Minor 5ss

35.8

-1.6

2.8

39.3

39.7

Minor BPS

43.9

-0.3

2.2

64.41

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021854

5591178 - 5607342

16165