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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5602293_5602787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5602293 - 5602787

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTGCTTTTATT

Flanking Amino Acid:

QGSAGPKGEQGITGPSGPIG

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

36.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

40.3

-1.1

3.5

58.3

46.6

Minor BPS

58.6

0.35

1.7

74.98

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021854

5591178 - 5607342

16165