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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5696238_5698766_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5696238 - 5698766

Intron Length:

2529

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGCTGGCT

5'SS Class:

weak_major

3'SS Sequence:

AAAATTCAATTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTCTCATTAAAA

Flanking Amino Acid:

WQHSTELMRRLGGCVDLCAA

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.7

0.04

1.3

57.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

52.1

0.05

50.1

Minor 5ss

14.6

-4.1

3.9

20.9

37.6

Minor BPS

60.9

0.34

1.8

69.75

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022519

5696043 - 5705912

9870