Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_585924_586506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

585924 - 586506

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTTGCACTAAAT

Flanking Amino Acid:

KLQPDQDVEKMCMPLLFQDK

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

72.5

0.56

1.2

63.4

Major PPT

0.81

0.6

80.7

31.3

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

51.1

0.11

2.1

79.58

41.7

Associated Gene:

Gene:

EXD3

Ensembl Gene ID:

ENSAPLG00000015358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018673

399892 - 700027

300136

ENSAPLT00000018211

399892 - 700027

300136

ENSAPLT00000016015

399892 - 700027

300136