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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5913291_5918386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5913291 - 5918386

Intron Length:

5096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

CTTCTCTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TCTTCCTGAGCC

Flanking Amino Acid:

EANMGLTPSSPNDPVTNICQ

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

84.5

0.78

0.7

25.3

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

64.8

0.44

1.7

75.45

40.9

Associated Gene:

Gene:

RXRA

Ensembl Gene ID:

ENSAPLG00000013150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013743

5902970 - 5952785

49816