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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6079030_6079498_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6079030 - 6079498

Intron Length:
469

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGAAG

5'SS Class:
strong_major

3'SS Sequence:
TCTTTTTGCATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATGAT

U12 Branch Point Sequence:
TCTTTTTGCATA

Flanking Amino Acid:
EIVQKLQGHTDVVISTACHP

Intron Amino Acid Position:
302

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.1
0.94
0.8
78.6
37.2

Major BPS
76.8
0.67
1
66
40.9

Major PPT
78.3
0.64
0.8
75.8
32.8

Minor 5ss
31.6
-2.1
3.1
38.7
46.6

Minor BPS
48.2
-0.1
1.8
62.75
38.6

Associated Gene:

Gene:
WDR5B

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6078929 - 6088648
9720