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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6084425_6085090_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6084425 - 6085090

Intron Length:
666

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAGGACA

5'SS Class:
strong_major

3'SS Sequence:
AATCTTATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAA

U12 Branch Point Sequence:
AAATATTTAACT

Flanking Amino Acid:
KTLKIWDVSSGKCLKTLKGH

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.5
0.74
1
72.7
38.3

Major BPS
79.5
0.73
0.9
70
36.9

Major PPT
78.3
0.64
0.9
74.8
38.9

Minor 5ss
33
-1.9
3.1
41.9
44.5

Minor BPS
67.4
0.63
1.4
77.87
37.7

Associated Gene:

Gene:
WDR5B

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6078929 - 6088648
9720