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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6116290_6117267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6116290 - 6117267

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAG

U12 Branch Point Sequence:

GATGACACAGCT

Flanking Amino Acid:

MFTNCYIYNKPTDDIVLMAQ

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

70.2

40.3

Major BPS

52.9

0.07

1.6

51.7

43.9

Major PPT

86.1

0.81

0.7

24.2

Minor 5ss

-2.1

3.2

44.2

Minor BPS

39.4

-0.7

2.1

56.88

44.6

Associated Gene:

Gene:

BRD3

Ensembl Gene ID:

ENSAPLG00000008591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008968

6113610 - 6132256

18647