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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6126726_6127671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6126726 - 6127671

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTGTCACCATT

Flanking Amino Acid:

EVVAMARKLQDVFEMRFAKM

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

91.1

0.93

0.6

88.3

21.4

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

43.3

-0.4

2.2

68.25

43.2

Associated Gene:

Gene:

BRD3

Ensembl Gene ID:

ENSAPLG00000008591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008968

6113610 - 6132256

18647