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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6128921_6129455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6128921 - 6129455

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCAACCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATACCCATGAAT

Flanking Amino Acid:

KKANSTTTANRQPKKGGKQA

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

63.9

0.31

0.9

53.8

36.2

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

50.3

0.09

1.8

70.57

39.4

Associated Gene:

Gene:

BRD3

Ensembl Gene ID:

ENSAPLG00000008591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008968

6113610 - 6132256

18647