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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6131759_6132140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6131759 - 6132140

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TTGCAAGTAACT

Flanking Amino Acid:

LNNNKKPAKKEKSGSAPSGG

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

36.4

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

89.5

0.89

0.6

22.6

Minor 5ss

31.2

-2.1

3.7

47.6

Minor BPS

46.1

-0.2

2.4

71.87

44.4

Associated Gene:

Gene:

BRD3

Ensembl Gene ID:

ENSAPLG00000008591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008968

6113610 - 6132256

18647