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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6223607_6234775_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6223607 - 6234775

Intron Length:

11169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TAACCACTAACA

Flanking Amino Acid:

FHSIAQTKGIRPFPSEETAE

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

0.45

0.9

67.6

25.3

Major PPT

82.9

0.74

0.8

77.1

30.8

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

-0

1.9

65.91

39.1

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567