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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6243466_6244950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6243466 - 6244950

Intron Length:

1485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

CCAATTTCAATC

Flanking Amino Acid:

YYKTLEDIEKNYMNPLKLVL

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.6

Major BPS

0.79

0.8

83.7

25.7

Major PPT

82.6

0.73

0.8

31.6

Minor 5ss

34.7

-1.7

2.9

44.4

43.1

Minor BPS

-0.3

1.5

46.98

36.8

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567