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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6245020_6245692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6245020 - 6245692

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

TTCTTCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGTTTCTTCATT

Flanking Amino Acid:

DMEAIFINLEDLIKVHFNFL

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

83.3

0.75

0.7

82.1

28.2

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

67.5

0.63

1.7

83.97

37.3

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567