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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6249054_6250383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6249054 - 6250383

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

ATTTCTTTAATA

Flanking Amino Acid:

NREDVRQKVEECTLKVQDGK

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

68.7

0.46

71.3

Major PPT

77.3

0.62

0.9

74.3

34.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

83.5

1.05

0.9

85.51

26.7

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567