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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6253747_6255448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6253747 - 6255448

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

CAGATCTGAGCC

Flanking Amino Acid:

SEFQSSIENLQVKLEEFGRP

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

85.4

0.8

80.9

31.1

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

44.9

-0.4

1.7

48.81

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567