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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6255535_6256058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6255535 - 6256058

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

GTTTGCTTGCTT

Flanking Amino Acid:

RSIVNHTKQDRYLFLFDKVV

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

70.5

0.46

1.1

68.8

41.9

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

42.8

-0.4

3.6

75.4

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007885

6146053 - 6265619

119567

ENSAPLT00000026236

6146053 - 6265231

119179