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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6256192_6257241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6256192 - 6257241

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

GTTCTCCCATTT

Flanking Amino Acid:

DPMNNKDIKKWSYGFYLIHL

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

89.6

0.89

0.6

84.7

22.9

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

43.1

-0.4

63.06

41.1

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567