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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6257352_6257610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6257352 - 6257610

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CCCTTCGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

AGGTCAGTAACC

Flanking Amino Acid:

RKWMEQFEMAMSNIKPEKAN

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

67.9

37.3

Major BPS

54.4

0.11

1.2

36.4

Major PPT

71.3

0.48

0.8

68.4

31.9

Minor 5ss

37.6

-1.4

2.9

49.1

40.1

Minor BPS

48.6

-0.1

2.2

62.87

42.2

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567