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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6257713_6257826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6257713 - 6257826

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTCTTTTATT

Flanking Amino Acid:

TNCKACKMFLRGTFYQGYLC

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.2

0.66

0.9

75.8

38.1

Minor 5ss

32.7

-2

45.6

Minor BPS

64.8

0.55

1.6

77.55

39.3

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567