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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6260370_6260572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260370 - 6260572

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TGATTTCCACCT

Flanking Amino Acid:

RGDPDSPWWEGRLLQTKKSG

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

78.9

0.65

0.9

37.4

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

43.1

-0.4

62.07

41.8

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567