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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6260648_6261012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260648 - 6261012

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTGCT

5'SS Class:

major

3'SS Sequence:

GCTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CTCGCAGCAACG

Flanking Amino Acid:

SVKPCPVDARPPNSRPPSRE

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.5

38.6

Major BPS

62.2

0.3

1.2

38.7

Major PPT

82.4

0.73

0.8

76.3

32.2

Minor 5ss

-1

3.1

50.4

Minor BPS

38.5

-1

2.4

44.07

47.5

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567