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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6261946_6262023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6261946 - 6262023

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CATCCTGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTCTTAAACA

Flanking Amino Acid:

AEAERFAISIKFNEEVKHIK

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

68.6

36.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

70.9

0.47

0.9

64.6

Minor 5ss

29.3

-2.4

3.1

32.9

35.6

Minor BPS

76.8

0.84

1.5

86.93

31.8

Associated Gene:

Gene:

VAV2

Ensembl Gene ID:

ENSAPLG00000007510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026236

6146053 - 6265231

119179

ENSAPLT00000007885

6146053 - 6265619

119567