Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_6276468_6278032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6276468 - 6278032

Intron Length:

1565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CCTGGCTGATGC

Flanking Amino Acid:

TGIKSTVCGPESFTADHKPL

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

71.1

0.48

0.8

61.7

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

36.6

-1

2.2

41.94

45.1

Associated Gene:

Gene:

SARDH

Ensembl Gene ID:

ENSAPLG00000007295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007614

6271500 - 6291957

20458