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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6289010_6289263_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6289010 - 6289263

Intron Length:
254

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGGGGC

5'SS Class:
major

3'SS Sequence:
TTGGTTTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
TTGCTGACAAGG

Flanking Amino Acid:
RAIDSLSIEKGYRHWHADLR

Intron Amino Acid Position:
771

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.2
56
41.5

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
75.6
0.58
1.1
72.9
42.2

Minor 5ss
32
-2.1
3.3
41.8
45

Minor BPS
34.4
-1.3
2.3
41.28
43.2

Associated Gene:

Gene:
SARDH

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6271500 - 6291957
20458