Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_6354789_6354886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6354789 - 6354886

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTTAAA

5'SS Class:

major

3'SS Sequence:

GTGCCTTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAATAT

U12 Branch Point Sequence:

TTTGCCTGACCC

Flanking Amino Acid:

RGVCVSGKCEPIGCDGILFS

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

68.1

38.3

Major BPS

44.9

-0.3

1.3

37.3

40.4

Major PPT

73.8

0.54

0.9

65.6

Minor 5ss

30.1

-2.3

2.7

34.1

41.4

Minor BPS

59.7

0.28

1.9

75.11

41.5

Associated Gene:

Gene:

ADAMTSL2

Ensembl Gene ID:

ENSAPLG00000007114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007397

6336824 - 6358975

22152