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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6370744_6372640_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6370744 - 6372640

Intron Length:
1897

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGCAGG

5'SS Class:
major

3'SS Sequence:
CTGTGCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGGAGAT

U12 Branch Point Sequence:
GATGGGCGAGCC

Flanking Amino Acid:
TALSIWVSLMALAEFDEPKR

Intron Amino Acid Position:
84

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1.1
63.6
48.1

Major BPS
44.7
-0.3
1.3
35.8
41.9

Major PPT
69
0.43
0.9
62.1
34.8

Minor 5ss
38.3
-1.3
2.8
40.5
45.4

Minor BPS
28.9
-1.6
2.3
37.9
39.6

Associated Gene:

Gene:
MYMK

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6368183 - 6374378
6196