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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6405097_6405181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6405097 - 6405181

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GTTCCCCAACCC

Flanking Amino Acid:

RPWQKAAFYCGMAVFPVMLS

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

69.5

42.7

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

86.3

0.82

0.7

84.1

23.9

Minor 5ss

-2.3

3.2

31.4

42.6

Minor BPS

44.9

-0.4

2.2

61.63

43.4

Associated Gene:

Gene:

CACFD1

Ensembl Gene ID:

ENSAPLG00000006756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007010

6404787 - 6410471

5685

ENSAPLT00000026689

6404787 - 6408680

3894