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Intron Name: Anas_platyrhynchos_platyrhynchos_18_642109_699960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

642109 - 699960

Intron Length:

57852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTGATCATAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

61.3

0.35

1.7

72.79

38.9

Associated Gene:

Gene:

EXD3

Ensembl Gene ID:

ENSAPLG00000015358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018673

399892 - 700027

300136

ENSAPLT00000016015

399892 - 700027

300136