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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6425916_6426042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6425916 - 6426042

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTCCTGTCATT

Flanking Amino Acid:

VMRQRICNNPRPAFGGRECQ

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

80.4

0.68

0.9

77.3

35.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.3

-0

2.3

76.64

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028734

6421945 - 6427839

5895