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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6435048_6435483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6435048 - 6435483

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GTGGTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GGTGGTTTAATT

Flanking Amino Acid:

SGIRPENIKTGEDFKTVQKE

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

69.4

0.44

65.8

45.3

Minor 5ss

-1.7

3.8

55.2

Minor BPS

52.5

0.16

1.9

68.79

42.8

Associated Gene:

Gene:

REXO4

Ensembl Gene ID:

ENSAPLG00000005865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006075

6433299 - 6437548

4250