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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6437485_6438169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6437485 - 6438169

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAAGTAA

5'SS Class:

major

3'SS Sequence:

CTTTTTCTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATA

Flanking Amino Acid:

LVDTALVKLQKCTVS*

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.6

0.62

0.9

82.9

26.1

Minor 5ss

37.1

-1.5

3.4

45.9

Minor BPS

80.8

0.96

82.55

32.7

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992