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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6438214_6439307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6438214 - 6439307

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ACTTATTTGACA

Flanking Amino Acid:

EIKSRFPSSMEIMTLVDTAL

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.4

38.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

0.81

0.8

36.1

Minor 5ss

41.3

-1

2.5

48.1

42.7

Minor BPS

62.3

0.38

1.5

69.25

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992