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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6439861_6440359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6439861 - 6440359

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACATTC

5'SS Class:

major

3'SS Sequence:

GTCTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

TCAGCCCAGATG

Flanking Amino Acid:

LALASLLRLSELSAFSFITD

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.2

68.6

37.4

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

80.8

0.69

0.8

77.2

31.5

Minor 5ss

48.2

-0.2

2.9

65.1

40.6

Minor BPS

-0.8

43.22

42.9

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992