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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6441036_6441730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6441036 - 6441730

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTAATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

GTTGTGGTAATT

Flanking Amino Acid:

CAVLWSLAVSENNADQALLK

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

67.6

0.4

1.1

63.5

46.3

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

43.7

-0.4

2.6

67.31

44.3

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992