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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6443421_6444232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6443421 - 6444232

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTTGTTTCAAAT

Flanking Amino Acid:

HLSSFVGDESALPYLPKFTE

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

71.8

34.2

Major BPS

77.3

0.68

81.5

Major PPT

78.2

0.63

0.7

72.3

Minor 5ss

37.2

-1.5

3.3

46.6

43.5

Minor BPS

49.8

0.07

1.7

69.61

41.4

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992