Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_6444317_6444925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6444317 - 6444925

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATAAGG

5'SS Class:

major

3'SS Sequence:

ATTTTTAATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATA

Flanking Amino Acid:

LLEGGIENVLEFMQAFWDVE

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.3

42.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.8

0.58

0.9

71.2

38.1

Minor 5ss

32.9

-1.9

2.9

40.9

44.9

Minor BPS

0.69

1.1

73.84

31.5

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992